The effect of developmental stages on microbiome assembly in the phyllosphere and rhizosphere of rice grown in urban area soil
文献类型: 外文期刊
作者: Peng, Qianze 1 ; Sun, Shu'e 2 ; Ma, Jiejia 5 ; Chen, Silu 5 ; Gao, Liming 5 ; Du, Xiaohua 2 ; Liu, Xian 6 ; Zhu, Feiying 2 ; Peng, Weiye 2 ; Liu, Yong 2 ; Su, Pin 2 ; Cernava, Tomislav 7 ; Zhang, Deyong 1 ;
作者机构: 1.Hainan Univ, Sch Trop Agr & Forestry, Haikou 570228, Peoples R China
2.Hunan Acad Agr Sci, State Key Lab Hybrid Rice, Changsha 410125, Peoples R China
3.Hunan Acad Agr Sci, Inst Plant Protect, Changsha 410125, Peoples R China
4.Natl Ctr Technol Innovat Saline Alkali Tolerant Ri, Sanya 572024, Peoples R China
5.Hunan Univ, Coll Biol, Longping Branch, Changsha 410082, Peoples R China
6.Hunan Agr Univ, Coll Orient Sci & Technol, Changsha 410128, Peoples R China
7.Univ Southampton, Fac Environm & Life Sci, Sch Biol Sci, Southampton SO17 1BJ, England
关键词: Phyllosphere; Rhizosphere; Urbanization; Rice; Microbiome assembly; Plant Microbiome
期刊名称:ENVIRONMENTAL MICROBIOME ( 影响因子:5.4; 五年影响因子:6.4 )
ISSN:
年卷期: 2025 年 20 卷 1 期
页码:
收录情况: SCI
摘要: BackgroundThe plant microbiome can support plant health and fitness in the face of biotic and abiotic stress. Research has mostly focused on plant growth in natural and agricultural soils. However, as urban areas continue to expand and soils change in the Anthropocene, microbiome assembly during development of plants grown in urban area soil remains largely elusive. Here, we examined the effect of developmental stages on the phyllosphere and rhizosphere microbiomes of rice grown in soil from an urban area during the vegetative growth stages.ResultsWe found that the microbial alpha and beta diversity, networks, and functions of the phyllosphere and rhizosphere microbiomes significantly differed among rice seedling, tillering, and elongation stages. Notably, we observed that bacteria assigned to potential animal parasites or symbionts not only exhibited significantly higher relative abundances in the phyllosphere compared to the rhizosphere but are also influenced by the developmental stages. Plants grown in the urban area soil had a higher relative abundance of Bacteroidales and enriched bacteria assigned to potential animal parasites or symbionts in the phyllosphere in contrast to plants grown in field. Some of these bacteria were shown to significantly influence the assembly of the phyllosphere microbiome and to prevalently engage in negative interactions with other microbes.ConclusionOur study provides new insights into developmental stage-resolved microbiome assembly of plants grown in urban areas. The insights could help in the development of strategies for promoting 'One Health' by highlighting the role of plants as alternative host for bacterial groups that are prevalently associated with animals.
- 相关文献
作者其他论文 更多>>
-
Endophytic Bacterial Community Structure and Function Response of BLB Rice Leaves After Foliar Application of Cu-Ag Nanoparticles
作者:Ning, Weimin;Li, Mingxuan;Jiang, Lei;Yang, Mei;Liu, Maoyan;Ning, Weimin;Liu, Yong;Liu, Yong
关键词:endophytic bacteria; Cu-Ag nanoparticles; bacterial community; BLB; rice
-
Cucumber green mottle mosaic virus encodes additional small proteins with specific subcellular localizations and virulence function
作者:Gong, Pan;Gao, Mengxin;Chen, Yalin;Zhang, Mingzhen;Hu, Xiaohua;Zhao, Siwen;Pan, Mengjiao;Cao, Buwei;Zhou, Xueping;Li, Fangfang;Gao, Mengxin;Zhou, Xueping;Huang, Yucong;Shen, Qingtang;Zhang, Hui;Liu, Yong;Liu, Yong;Lozano-Duran, Rosa;Wang, Aiming
关键词:positive-sense single-stranded RNA viruses; tobamoviruses; cucumber green mottle mosaic virus; small ORFs; peroxisomes; virus pathogenicity
-
Quantitative analysis of ethylene precursor ACC in plant samples by liquid chromatography-tandem mass spectrometry
作者:Tong, Jianhua;Deng, Danyi;Xiao, Langtao;Zhao, Wenkui;Wang, Keming;Zhu, Feiying
关键词:Ethylene; 1-Aminocyclopropane-1-carboxylic acid; Phytohormone; Tandem mass spectrometry; Liquid-liquid micro-extraction; Precise control of the mobile phase
-
Host metabolites explain microbiome variation between different rice genotypes
作者:Su, Pin;Peng, Weiye;Sun, Shu'e;Du, Xiaohua;Bai, Lianyang;Liu, Yong;Zhang, Deyong;Su, Pin;Peng, Weiye;Sun, Shu'e;Du, Xiaohua;Bai, Lianyang;Liu, Yong;Zhang, Deyong;Kang, Houxiang;Peng, Qianze;Zhang, Deyong;Peng, Qianze;Zhang, Deyong;Zhang, Chi;Lei, Ziling;Liu, Yong;Zhang, Deyong;Tang, Qianjun;Cernava, Tomislav
关键词:Plant genotype; Plant microbiome; Genetic control; Plant metabolites; Phenylpropanoids
-
Analysis of the Antagonistic Effect of Dibutyl Phthalate on Magnaporthe oryzae through Bioassay and Omics Data
作者:Qin, Yingfei;Wu, Xiyang;Tan, Xinqiu;Liu, Yong;Zhang, Deyong;Chen, Yue;Qin, Yingfei;Wu, Xiyang;Tan, Xinqiu;Liu, Yong;Zhang, Deyong;Chen, Yue;Qin, Yingfei;Wu, Xiyang;Tan, Xinqiu;Liu, Yong;Zhang, Deyong;Chen, Yue;Qin, Yingfei;Wu, Xiyang;Tan, Xinqiu;Liu, Yong;Zhang, Deyong;Chen, Yue
关键词:dibutyl phthalate; antifungal activity; Magnaportheoryzae; transcriptome; metabolome
-
Metabolomic Profiling Reveals the Effects of Cu-Ag Nanoparticles on Tomato Bacterial Wilt
作者:Ning, Weimin;Jiang, Lei;Yang, Mei;Lei, Tianhao;Liu, Chan;Zhao, Fei;Shu, Pan;Ning, Weimin;Liu, Yong;Ning, Weimin;Liu, Yong
关键词:Cu-Ag nanoparticles; tomato; metabolomics; fatty acyls; organooxygen compounds
-
Analysis of Cadmium Accumulation Characteristics Affected by Rhizosphere Bacterial Community of Two High-Quality Rice Varieties
作者:Zhang, Shangdu;Peng, Ju;Wu, Xiang;Meng, Xiufei;Qin, Yuanyi;Luo, Zhengliang;Zhu, Feiying
关键词:cadmium; microbiome; rice; rhizosphere bacterial



